Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 4e-50
 Identities = 120/355 (33%), Positives = 195/355 (54%), Gaps = 9/355 (2%)

Query: 194 VIAVAILSLLLVAIRKILLIIGGEP-----NEVRSAVQAVAQGRIRREFVIKAPKESIYG 248
           +  + I  LL+  I  +++ + G        ++ + +  +AQG       + + +    G
Sbjct: 358 IFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELG 417

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDS----QQQSTAMIATAMT 304
           A+    ++    +  +   +V+   +++ +      IA  T+     Q      +ATA+ 
Sbjct: 418 AIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVH 477

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
           EM ++A  VA +A   A     ADQ +    +++ +T ++I  LA ++  A + V  L  
Sbjct: 478 EMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAK 537

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
           D +NI  +L  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +TQ +T+E
Sbjct: 538 DSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEE 597

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           IQ MI  LQ+G+R+ ++ ++     +  SVQ +  AA AL  I  A+  ++ M+ QIA+A
Sbjct: 598 IQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASA 657

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           A EQ+ V++DI R +  I +  ++++    ES  ++  LTKLA +  +    F+V
Sbjct: 658 AEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712