Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  198 bits (503), Expect = 5e-55
 Identities = 123/354 (34%), Positives = 197/354 (55%), Gaps = 7/354 (1%)

Query: 193 VVIAVAILSLLLVAI------RKILLIIGGEPNEVRSAVQAVAQGRIRR-EFVIKAPKES 245
           +++A+  L++LL A+      R +L  +G EP+E+    Q VA G +R  E  I+ P+ S
Sbjct: 198 LLLAITALAVLLAAVLGYVISRNLLRALGAEPSELNQLAQRVANGDLRASERTIEPPQAS 257

Query: 246 IYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTE 305
           I  A+  M  +L D+   +  S   +          +   AE     Q     I TA+ +
Sbjct: 258 IMAALLSMQENLRDMTKGINLSSQTVAESSQELSQSSLRNAESVAMAQCEVEQIVTAVHQ 317

Query: 306 MASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLD 365
           MA++   VA +A   A    +AD  + ++Q+   + V+ I  LA  ++ ++ A+  L  +
Sbjct: 318 MAATVQDVARNAESAASAASEADSAALYSQQKAKDAVNMISELAETIEQSNMAMGRLKNE 377

Query: 366 VKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEI 425
             NI  VL+VI  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ +T EI
Sbjct: 378 TGNIGGVLEVIKSVADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKATSEI 437

Query: 426 QQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAA 485
           + +I +LQ+ +    Q +Q C  +S  SV     A  A++ IV+ +E ++ M+HQIA AA
Sbjct: 438 EGLIASLQKIADETSQHMQRCKSSSAQSVSGVSEAGDAVSTIVTMIERINGMNHQIAAAA 497

Query: 486 AEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
            +Q+ V++ I+R I  + ES  + +     +   ++ L + +  L +  + F++
Sbjct: 498 EQQSTVAEQISRGIVTVSESAEQSAAAFRSAQQESEGLARTSVTLRENISRFQL 551