Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  196 bits (499), Expect = 1e-54
 Identities = 122/351 (34%), Positives = 201/351 (57%), Gaps = 2/351 (0%)

Query: 189 LSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKESIYG 248
           L+  V I +++L  LL+ IRK+   +G EP EV  A++ +A G + +    + P +S+ G
Sbjct: 197 LASAVAIILSVLVSLLI-IRKVKATLGAEPEEVAEAIRRLADGELNQRIETRYP-DSVMG 254

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
            ++   + L+D ++++  +  ALR       + A    +  + Q      +A A+T+MA+
Sbjct: 255 ILKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNRQQINLQTSEAQHVAAAITQMAA 314

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           S ++V+  A   +  T  AD +     +L+     +I+ LAT L  A+  V  +  D +N
Sbjct: 315 SVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIEELATILDHATLRVNQVSSDSEN 374

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           I  V++VI  IA QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST+EI+ M
Sbjct: 375 IETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATRTQESTQEIRDM 434

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           I  LQ G+++A   +Q     +Q++V ++ ++  AL  I   + ++++M+ QIA+ + +Q
Sbjct: 435 IGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAMNAQIASVSVQQ 494

Query: 489 TQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           +  ++++A+ +  I  S  + +    +  NS   L +LA  L    A F V
Sbjct: 495 SAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAELADRLSTKVAFFNV 545