Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  186 bits (473), Expect = 1e-51
 Identities = 120/355 (33%), Positives = 196/355 (55%), Gaps = 6/355 (1%)

Query: 187 WQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKES- 245
           W + + V+ A+  + L ++  R I+L +     +     Q VA G +  E  +    E  
Sbjct: 191 WVIGMIVLTALVTIGLAVLLTRSIVLPLA----QSLKVAQGVASGDLTGEISVCGRDEPA 246

Query: 246 -IYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMT 304
            +  A++ M  +L D + ++ +S   L S         +        Q Q     ATA+ 
Sbjct: 247 RLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVN 306

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
           +M ++  +VA +A  T+  + ++D+ +Q  ++ +  TV +I+ LAT +    T V DL  
Sbjct: 307 QMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQ 366

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
            V  I+KVLDVI  IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RTQ ST+E
Sbjct: 367 KVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQE 426

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           I+QMI  +Q+G+  A+ ++Q     ++S++  +++A +AL  I SA   ++  +  IA+A
Sbjct: 427 IEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASA 486

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           + +Q  V+ ++ R +  I +   + S    ++  ++  L++LA +L    A F V
Sbjct: 487 SEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541