Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  180 bits (456), Expect = 2e-49
 Identities = 111/349 (31%), Positives = 194/349 (55%), Gaps = 11/349 (3%)

Query: 195 IAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGR--IRREFVIKAPKE--SIYGAV 250
           I+V ++  ++  I K LL        ++ AV  +AQG   + R   +    +   I    
Sbjct: 301 ISVGVIIFIINQIYKPLL-------RLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGF 353

Query: 251 QQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMASSA 310
            + S +L +++ ++  +   + S +      AK   ++  S    T  + TA+T+M+ SA
Sbjct: 354 NRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESA 413

Query: 311 NQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIA 370
             VA+S   +   T+ A +++Q +  +++N VS +  L   ++  S ++++++ D   I+
Sbjct: 414 RTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKIS 473

Query: 371 KVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIH 430
           +VL VIG I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EI  M+ 
Sbjct: 474 EVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLT 533

Query: 431 NLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQ 490
            L EG+ + +  ++   Q  Q++  ++   + +L ++ +++  +  +S QIA A  +Q+ 
Sbjct: 534 KLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQST 593

Query: 491 VSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           V+ +++R +  I E    L     ++  +T++L+    ELEQ    F++
Sbjct: 594 VAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642