Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  195 bits (496), Expect = 4e-54
 Identities = 132/368 (35%), Positives = 203/368 (55%), Gaps = 4/368 (1%)

Query: 175 NEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEP-NEVRSAVQAVAQGRI 233
           N+  A   S  Q      VVI +A++ LL  AI   +     EP   +   ++++ QG +
Sbjct: 306 NQSLAEAGSVYQQGAIKAVVIGIAVV-LLATAIGYHIAHSVREPVTRILKTLESLTQGNM 364

Query: 234 RREFVIKAPKE--SIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDS 291
            +   I+   E   +   +  ++ +L D++ KL  +   L +  +   T + S     +S
Sbjct: 365 TQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKLNS 424

Query: 292 QQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQ 351
           Q++ T+ +A AMTEMA S  +VA+SA+++     Q +  S+  ++++   +S I+ L T+
Sbjct: 425 QREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETR 484

Query: 352 LQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 411
           L  +  AV DL      I  +LDVI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 485 LIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 544

Query: 412 RNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSAL 471
           R LA RT  ST EI+ MI NLQ  S  A + I+ C Q  + SV+++ +A SA+  I + +
Sbjct: 545 RVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALI 604

Query: 472 ESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELE 531
             +S MS  I+ AA EQ + +  IAR I  I     +  + + +   ++  LT LA +  
Sbjct: 605 IEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQTSANLTALANQQS 664

Query: 532 QWAAHFEV 539
           +    F++
Sbjct: 665 ELVHRFKL 672