Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 4e-50
 Identities = 118/351 (33%), Positives = 188/351 (53%), Gaps = 4/351 (1%)

Query: 193 VVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKESIYGAVQQ 252
           +  A+ I  +++V +  ++  +  +   V  A++ +A G       ++   +   G +  
Sbjct: 281 ITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLAS 340

Query: 253 ----MSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMAS 308
                 S++  +V KL     AL  +      +A+  +     QQ    M+ATA+ EMA+
Sbjct: 341 NFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAA 400

Query: 309 SANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKN 368
           +  ++A +A  TA N  +A     H    +  T  +IQ LA ++Q A+  + +L+     
Sbjct: 401 ATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQ 460

Query: 369 IAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQM 428
           I+ +L  I +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  STKEIQQM
Sbjct: 461 ISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQM 520

Query: 429 IHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQ 488
           I  LQ  +  A+  +    + + +SV ++  A+ +L  I   +E +S M+ QIA+AA EQ
Sbjct: 521 IETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQ 580

Query: 489 TQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
             V+ +I R    I +  + L++    +      L++L+ ELEQ    F++
Sbjct: 581 ASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631