Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  184 bits (466), Expect = 1e-50
 Identities = 117/355 (32%), Positives = 203/355 (57%), Gaps = 12/355 (3%)

Query: 193 VVIAVAILSLLLVAIRKILLIIG-GEPNEVRSAVQA-VAQGRIRREFVIKAPKE--SIYG 248
           ++ +VA+L++++ A+   L+ +   +P     AV A +A+G + +   ++   E   +  
Sbjct: 297 LLTSVALLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQT 356

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELT----DSQQQSTAMIATAMT 304
           ++++M+ SL DL+  ++Q +     +L+ A T+  + +E T    + Q++ T  +ATAM 
Sbjct: 357 SMREMTLSLRDLIGGIDQGV----GQLSQAATQLAASSEDTKLRINQQREETDQVATAMN 412

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
           +M+++  +VA +A   +     ADQQ+Q   +++   +  I+ LA Q+     A+  L  
Sbjct: 413 QMSATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAG 472

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
           + + I  +LDVI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT T+T+E
Sbjct: 473 ESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEE 532

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           I Q+I +L  G+    + +      ++ SV+ S  A  AL+ I   + S+  M+ QIATA
Sbjct: 533 IGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATA 592

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
           + EQ+ V++ I R +  + +   + S    ++  S+  L +L ++L      F +
Sbjct: 593 SEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647