Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  192 bits (487), Expect = 4e-53
 Identities = 123/370 (33%), Positives = 208/370 (56%), Gaps = 13/370 (3%)

Query: 176 EVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRR 235
           EV     + A+  L++  V+A+A+  L   AI + ++I      +   A + VA G + +
Sbjct: 276 EVRDAAAAQAKTLLTVATVLALALGLLAAWAITRQIII---PLRQTLRAAERVASGDLTQ 332

Query: 236 EFVIKAPKE--SIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELT---- 289
              ++   E   +  ++ +M+  L +L+  +   +    +++A A     ++ E T    
Sbjct: 333 SLQVQRRDELGQLQASMHRMTQGLRELIGGIGDGV----TQIASAAEELSAVTEQTSAGV 388

Query: 290 DSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLA 349
           ++Q+  T  +ATAM +M ++ ++VA +A   +     ADQQ++   +++   V+ I+ LA
Sbjct: 389 NNQKVETDQVATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLA 448

Query: 350 TQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 409
           +++  +S A+  L  +   I  VLDVI  +A+QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 449 SEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVAD 508

Query: 410 EVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVS 469
           EVR+LA RTQ ST+EI+++I  LQ G++     +    Q + SSV+ +  A S+L  I  
Sbjct: 509 EVRSLAQRTQQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITR 568

Query: 470 ALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARE 529
            + S+ +M+ QIATAA EQT V+++I R +  + +   + S    E+ +S+  L +L   
Sbjct: 569 TVSSIQAMNQQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTH 628

Query: 530 LEQWAAHFEV 539
           L+     F +
Sbjct: 629 LQGLVGRFRL 638