Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  188 bits (478), Expect = 5e-52
 Identities = 130/395 (32%), Positives = 208/395 (52%), Gaps = 14/395 (3%)

Query: 152 EEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKIL 211
           E  L++        W +   +  +E+ A+    A W  SL +  AVA++SLLLV     +
Sbjct: 258 ERYLALGLPLRDLNWTLVAEVPESEIYAQMHQ-AVWLTSL-IGGAVALVSLLLV-----V 310

Query: 212 LIIGGEPNEVRSAVQAVAQ-----GRIRREFVIKAPKE--SIYGAVQQMSSSLADLVAKL 264
           L+  G    +R    A+ Q     G +          E   +     +   S   L+ ++
Sbjct: 311 LLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEV 370

Query: 265 EQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNT 324
             +   LR  +        + AE +  QQ+ T M+ATA+ EM  +   +A +A D A  +
Sbjct: 371 LSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQAS 430

Query: 325 DQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTN 384
             A  ++   ++++  ++  I+G++  +  A+ AV+ L  +V ++ +VL VI  I+EQTN
Sbjct: 431 QSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTN 490

Query: 385 LLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQ 444
           LLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST E+QQMI  L+ G+ +A+ ++Q
Sbjct: 491 LLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQ 550

Query: 445 ICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEE 504
              Q + S V+ S+   ++L+ I   +E +S M+HQ+ATA  EQ+ V+++I R +  I +
Sbjct: 551 AGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISD 610

Query: 505 SGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
              + +  V       Q L  LA +L +    F +
Sbjct: 611 LARETAAEVQGCREECQALRGLADDLARQMGGFRL 645