Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  182 bits (461), Expect = 4e-50
 Identities = 122/355 (34%), Positives = 187/355 (52%), Gaps = 4/355 (1%)

Query: 189 LSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKESIYG 248
           +S  V++AV +  LL      I+  I    ++V  +++ +AQ        I+   E   G
Sbjct: 185 ISTGVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDLTVRIETKSEDEIG 244

Query: 249 AVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELT----DSQQQSTAMIATAMT 304
            +    +   D +  + + +V     L+      + + E T    D QQ+S      A+ 
Sbjct: 245 ELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTIDVQQKSATNAKRAVD 304

Query: 305 EMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDL 364
            M+ S + VA SA   A + ++A   ++  ++++  TV++IQ LA  ++  +  +A L+ 
Sbjct: 305 TMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLAENVRETADVIARLES 364

Query: 365 DVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKE 424
           D   +  VLDVI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST+E
Sbjct: 365 DSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEE 424

Query: 425 IQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATA 484
           IQ  I  LQ  + +A++ +    + + SSV+ +  A S+L  I S +  ++ M+ QIA  
Sbjct: 425 IQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETITSTIGRINQMNEQIAHN 484

Query: 485 AAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539
             +Q  V+ DI R ++ I E   + +    E  +    L  LA+ LE  A  F V
Sbjct: 485 TEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLAQHLESIAKQFRV 539