Pairwise Alignments

Query, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  214 bits (545), Expect = 7e-60
 Identities = 141/482 (29%), Positives = 238/482 (49%), Gaps = 23/482 (4%)

Query: 53  TEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFH 112
           T +   A    + E  AK  A   ++   Y  + Y ++ D+  + V  P+ P L      
Sbjct: 55  TMLSSFAARTDVDEATAKQQALEAVKALRYDGSNYFWIQDQTPSMVMHPIKPALDGQDLR 114

Query: 113 DFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGI 172
            FKDG G +    +   ++ +    V+Y W     + S  +K+S  ++   WGW VG+GI
Sbjct: 115 TFKDGNGKAFFIEMAQKVKSKGEGFVDYVWPLP-GEESPTDKISYVKEFKPWGWTVGSGI 173

Query: 173 GFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGE----PNEVRSAVQAV 228
               +   F           V+    ++S++LV +  ++ +IGG       EV   ++ +
Sbjct: 174 YLTNLEKEFAHLRN------VIAVFCLVSIVLVVV--LVYVIGGSIVKPVQEVSERMKDI 225

Query: 229 AQGRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAG-------AGTR 281
           +QG      + ++  E+    V +++    +   K+  S++ +R  +           T 
Sbjct: 226 SQGE---GDLTRSLPETGQDEVTRLARYFNEYTEKMRHSLLGIRENINSLTQQAELVETS 282

Query: 282 AKSIAELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNT 341
           +K+      +Q ++   +A AM EM +  N+V+++A     +T  A    Q+   ++ +T
Sbjct: 283 SKNSNAQAQTQNENMLQVAAAMEEMTTQINEVSNNADSAEKSTSSARGNVQNGASVVDST 342

Query: 342 VSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQG 401
           V++I+ L + +++ S+AV +L    ++I  VLDVI  IAEQTNLLALNAAIEAARAGEQG
Sbjct: 343 VNDIRSLTSDIESVSSAVTELAAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQG 402

Query: 402 RGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAA 461
           RGFAVVADEVR LA RT  ST EIQ MI  LQ  +++A+  +++    S  +V  +  A 
Sbjct: 403 RGFAVVADEVRTLASRTGQSTDEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQAN 462

Query: 462 SALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQ 521
             L      +  ++ MS +IA A  +Q + + +   RIN +  +     R   E   ++Q
Sbjct: 463 QNLQEADRLMTEIADMSSEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQ 522

Query: 522 TL 523
            L
Sbjct: 523 AL 524