Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 864 a.a., LPS-assembly protein LptD @ Organic solvent tolerance protein precursor from Variovorax sp. SCN45

 Score =  177 bits (450), Expect = 2e-48
 Identities = 181/799 (22%), Positives = 304/799 (38%), Gaps = 101/799 (12%)

Query: 4   PMSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVE 63
           P++  S   L A  ++A  AP +    ++   R  L      L     PT  GQ P  V 
Sbjct: 18  PLAVLSLALLQAQGASAQQAPSLDGPLTL--KRTPL------LTETIPPTERGQLPSLVT 69

Query: 64  ADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTK 123
            D++      +    GN  + +G   I AD +  +Q +++  A GNV+ + G       +
Sbjct: 70  GDRISGRPDLETVVEGNATLRRGALGITADRLEYYQPDDLAKATGNVRVNQGGNVYEGPE 129

Query: 124 ATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSC-----PDGDNA 178
               L T E    N RYQFL     GEA  +      V      + T+C     P    A
Sbjct: 130 LQLKLETFEGFFNNVRYQFLANEAHGEAQRIDFVDANVSVARQATYTTCRREDFPGWMPA 189

Query: 179 WRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRN 238
           W + A+++  D  E      N RL    +    +P ++ P+   RK+G L PT    + N
Sbjct: 190 WLLTATTLTTDTEENEGVAKNARLSFMGITTPPIPSVSFPLSSERKSGLLPPTIGIDNTN 249

Query: 239 GYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQL--- 295
           G     P YWN+AP  D   T   M KRG   ++ FRYL     G ++ +++  D+L   
Sbjct: 250 GIEISQPYYWNIAPNRDATITPTIMSKRGVDFSNEFRYLEKDYKGTVRLDFMGSDRLVGQ 309

Query: 296 ------HTELGD---------------------RWAFQYEHNGIFQ------QAWKFEID 322
                 +T+L                       RW     H+  F        +    I 
Sbjct: 310 RYNELRNTQLQQLMSGQIQPQDLTLGNGPGSTRRWGLWATHHQDFDAKALGLDSLAANIS 369

Query: 323 YSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLP 382
            ++VSD +Y+ D  +   +    QL  +    +   +W   +    +Q L  + +     
Sbjct: 370 INRVSDNDYWRDF-TRTPSLAQRQLPNDASLNWAKGDWSGGIRALQYQNLQYNLSPITPA 428

Query: 383 YRLMPQLSYNYYAPETMKY---LDLD--------LVSHVSRFETDARGKPSATRVHIEPG 431
           Y  MPQ++ NY   +   +   L+LD        +++    ++ + + +P   R      
Sbjct: 429 YDRMPQITANYNKYDWHGFDVSLNLDYTHFRVNTILNGQPGYDPNQQSQPDGDRAMAVAS 488

Query: 432 LKIPF--------------SNTWGNWTTEA-----RVLGTYYQQDLDKTTDAKL--EESV 470
           +  PF              + T+  +  +A      V GT Y   +    ++      S 
Sbjct: 489 ISRPFITPSSYVIPKLMLNAATYNYYLPQADIPKLTVNGTQYVGGIPYNPNSLYFYPTSS 548

Query: 471 TRVIPEIRSVAGIVLERDTVLLDD-YTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYY 529
           TR +P     +G+  ERDT      + QTLEP+  Y+Y P + Q+ +  YDS      + 
Sbjct: 549 TRTVPTFSIDSGLTFERDTSYFGRAFRQTLEPRAYYVYTPYRNQNMLPNYDSAANDFSFA 608

Query: 530 GLFRSRKYSGVDRIESANQVSYGASTRFFD-SNYKERLNIAFGQIFYLDSKLNPSNKN-- 586
            ++    +SG DR+   N ++ G ++R  D +   E   +   Q      +L  SN+N  
Sbjct: 609 TIYTENAFSGGDRVSDTNALTLGVTSRLIDPATGVEAARVGIAQ------RLRFSNQNVV 662

Query: 587 -PDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGY-IQA 644
            P  T      S   +    N+         +QY+ D++  +    +  Y     + + A
Sbjct: 663 LPGGTPVTDRSSDLLIGGQINWTPKWSVDTLVQYNPDTRKSERSAISARYNPEPYHNLSA 722

Query: 645 NYRYVAKDYIRNTVGDSITN------IDDITRDGISQAGILAGYQLSRKWSASGQYYYDL 698
            +RY A      T G    +      ++D+  D     G   G Q   +W A G+  YDL
Sbjct: 723 AFRYQAPSTPTATDGSKSFDVGWQWPVNDLWGDKGKNLGPGKG-QGGGRWYAVGRINYDL 781

Query: 699 TTDEALEWLANLTYTSDCW 717
              +  + +    Y   CW
Sbjct: 782 DGKKVTDGVLGFEYDGCCW 800