Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., LPS-assembly protein LptD @ Organic solvent tolerance protein precursor from Sphingobium sp. HT1-2

 Score =  104 bits (259), Expect = 2e-26
 Identities = 167/802 (20%), Positives = 302/802 (37%), Gaps = 105/802 (13%)

Query: 4   PMSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVE 63
           P+S F +  LA + S+ L A  +       + +   P       + P P N   Q I   
Sbjct: 7   PLS-FKQALLAGAASSCLLAAPLAHAQQAPEPKLNEPQTPISAPDAPVPDN--DQEIGFA 63

Query: 64  ADKLEA-INGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHST 122
           AD LE   N Q  T +GNV +++   R+ AD +   +    V A+G V   D +      
Sbjct: 64  ADTLEYDTNSQVVTATGNVQLLRDGNRLRADKIVWDRNTGKVEAQGAVSVIDPDGNVAYG 123

Query: 123 KATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSCP----DG--- 175
              +  +T +    +     L + GR  A    +    VY +   + T CP    DG   
Sbjct: 124 DRFDVTDTLKDGAVDNILLVLQKGGRMAATKGERVN-GVYTLHHAAYTGCPVEGSDGCPK 182

Query: 176 DNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYG 235
           +  W++ A  +  D  ++  ++    +E+  +P+  +P L+ P+GD   +G L P   Y 
Sbjct: 183 EPTWQINAVKVVYDPTKQRVSYTRANVELFGLPLIPVPGLSHPVGDDGGSGLLVPNIRYD 242

Query: 236 SRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRY--------LTDFGAGQIKS 287
             NG+   VP Y  LAP  DL  T +        +   FR+        +T +     +S
Sbjct: 243 RVNGFEVAVPYYLKLAPNRDLTVTPHVYSDSLPMIEGNFRHLYDRGAYQITGYATYGSRS 302

Query: 288 EYLADDQLHTEL--------GDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGV 339
             +       ++        G + + ++  NG  + A   +  + +  DI+    L S +
Sbjct: 303 SGITPTDSQKDIRGAIDASGGMQLSPEWSVNGSIRVAT--DRTFLRRYDISRDDRLRSTL 360

Query: 340 GNREDGQ---------LIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLS 390
           G +  G+          +Q  R          AL V D++L  KD         L  Q+ 
Sbjct: 361 GVQRIGENSYFSLAGWAVQTLRVDDPQGQMPIALPVMDYRLRMKDPL-------LGGQIQ 413

Query: 391 YNYYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVL 450
           +        +    D     + FE + R            G ++ F+             
Sbjct: 414 FQANTLAITRTEGQDTQRAFAAFEWNLRKLTGL-------GQEVNFT------------- 453

Query: 451 GTYYQQDLDKTTDAKLEESVTRVIP---EIRSVAGIVLERDTVLLDDY---TQTLEPKIQ 504
            TY + D+  ++D  L ++++       + R +A   ++     + +     Q + P++Q
Sbjct: 454 -TYLRGDVYHSSDNLLTDTISYAGDPGWKARGIAAAAVDMRWPFMGEAFGGVQRIAPRVQ 512

Query: 505 YLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKE 564
            +  P     ++   D+  +  +   LF   +++G DR E +++++YG        ++  
Sbjct: 513 IVASPHLANLSVPNEDARSVDLEDSNLFALNRFAGYDRFEDSSRITYGLEYNLALPDFTL 572

Query: 565 RLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQ 624
             N+  GQ + LD   N ++  PD T      S         + D++ +    + D D+ 
Sbjct: 573 DANV--GQSYRLD---NRASILPDGTGLSDRMSDIVGRWTIRYKDFVSFTQRFRVDKDNL 627

Query: 625 AVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQL 684
           AV+              + +   Y    Y+R     +IT  D   R+ +   G +   Q 
Sbjct: 628 AVRRNE-------VDATVGSKKTYAQISYLRLNRNANITLEDLQDREELRLGGRI---QF 677

Query: 685 SRKWSASGQYYYDLTTD-----------EALEWLANLTYTSDCWYVGFTYSNQLKSWNGN 733
           +R WS  G    DLT             E +     + Y  DC  +GFT+    ++ NG 
Sbjct: 678 ARFWSVFGSTVIDLTGAQEDPGTTADGYEPVRQRLGVAYEDDCLTLGFTWRRDYQT-NG- 735

Query: 734 FVTDPYATPIYENNFSF-NIGI 754
              D  A   ++   +F NIGI
Sbjct: 736 ---DARAGNSFQLRLAFRNIGI 754