Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 786 a.a., Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  494 bits (1271), Expect = e-144
 Identities = 276/779 (35%), Positives = 422/779 (54%), Gaps = 38/779 (4%)

Query: 11  TFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAI 70
           T LA  I++AL++ Q  A          +P+ ++ LV      +    P+ + AD  +  
Sbjct: 7   TLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKG----DTNDLPVTINADNAKGN 62

Query: 71  NGQKATYSGNVVVVQGKKRIAADNVTLHQQE--------NVVVAEGNVQFSDGEIKTHST 122
               A ++GNV ++QG  R+ AD V LHQ++          V A GNV + D ++     
Sbjct: 63  YPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGP 122

Query: 123 KATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEI-EDGSITSCPDGDNAWRM 181
           K   +LNT +  +    YQ +   GRG+A  + + G+  Y I E+GS TSC  G + W +
Sbjct: 123 KGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTWSV 182

Query: 182 RASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRNGYS 241
             S +  D+ E++A  +N R +V  VP+FY PYL +P+GD R++GFL P A Y ++N + 
Sbjct: 183 VGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNYFE 242

Query: 242 FEVPIYWNLAPQYDLETTFNYMQKRGTQL-NSVFRYLTDFGAGQIKSEYLADDQL----H 296
           F +P YWN+AP  D   T +YM +RG  +  + FRYLT  G G ++ +YL  D++    H
Sbjct: 243 FYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYEDDH 302

Query: 297 TELGD--RWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRAT 354
            + GD  RW F ++H+G+  Q W+F +DY+KVSD +YF+D DS  G+  DG   Q+    
Sbjct: 303 PKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVG 362

Query: 355 YRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFE 414
           Y   N+D+ +  + FQ+     TS+   Y   PQL  NYY  +   + D  +      F 
Sbjct: 363 YAVQNFDATVSTKQFQVFNDQNTSS---YSAEPQLDVNYYHNDLGPF-DTRIYGQAVHFV 418

Query: 415 TDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQ------DLDKTTDAKLEE 468
                 P ATRVH+EP + +P SN WG+  TEA+++ T+YQQ      + D     KLE+
Sbjct: 419 NTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLED 478

Query: 469 SVTRVIPEIRSVAGIVLERDTVLL-DDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTD 527
           SV RV+P+ +    ++ ERD  +L   YTQTLEP++QYLYVP + Q  I  YDS+LLQ+D
Sbjct: 479 SVNRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSD 538

Query: 528 YYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNP 587
           Y GLFR R Y G+DRI SANQV+ G +TR +D    ER N++ GQI+Y        +   
Sbjct: 539 YNGLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIK 598

Query: 588 DSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEY-RVASGYIQANY 646
               DKT    WA +  +  ++      G+QYD    +V   +S+LEY R     +Q NY
Sbjct: 599 WENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNY 658

Query: 647 RYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEW 706
           RY + +YI+ T+    +  +   ++GI+Q G +A + ++ +WS  G YY+D  + +  + 
Sbjct: 659 RYASPEYIQATLPSYYSTAEQY-KNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQ 717

Query: 707 LANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNIGIIGFGTSIGAGS 765
           +  L Y S C+ +   Y  +L  W+ +         IY+N   FNI + G  ++ G G+
Sbjct: 718 MLGLQYNSCCYAIRVGYERKLNGWDND-----KQHAIYDNAIGFNIELRGLSSNYGLGT 771