Pairwise Alignments

Query, 787 a.a., LPS assembly protein LptD from Vibrio cholerae E7946 ATCC 55056

Subject, 791 a.a., LPS assembly protein LptD from Dickeya dianthicola ME23

 Score =  500 bits (1288), Expect = e-145
 Identities = 288/793 (36%), Positives = 426/793 (53%), Gaps = 61/793 (7%)

Query: 11  TFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNP------GQQPINVEA 64
           T LA+ I +AL++ Q  A+ +            QC+   P    P       Q P++++A
Sbjct: 7   TLLASLIGSALYSQQALADLA-----------SQCMSGVPVYNRPLVTGDTNQLPVHIKA 55

Query: 65  DKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQEN--------VVVAEGNVQFSDGE 116
           D+ +A     A ++GNV V QG + + AD V L+Q+           V A GNV + D +
Sbjct: 56  DQSQANYPDSAVFTGNVNVEQGNRVLTADQVQLNQKPQPGQTDPIRTVTAIGNVHYDDNQ 115

Query: 117 IKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIED-GSITSCPDG 175
           +     +A ++LNT +  +EN  Y  +   GRG+A  + +     Y I D GS TSC  G
Sbjct: 116 VILKGPRAWSNLNTKDTDVENGDYLMVGRQGRGDADKMKQRENNRYTILDNGSFTSCLPG 175

Query: 176 DNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYG 235
           D++W +  S +  D+ EE+A  +N R  +  VPVFY PY+ +PIGD R++GFL P+A YG
Sbjct: 176 DDSWSVVGSEVIQDRQEEVAEIWNARFHIAGVPVFYSPYMQMPIGDKRRSGFLIPSAKYG 235

Query: 236 SRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQL 295
           +RNG+    P YWN+AP YD   T +    RGTQ  + FR+L+ FG   ++ ++L +D+ 
Sbjct: 236 NRNGFELVTPYYWNIAPNYDATITPHVQTNRGTQWQNEFRHLSRFGFSVVEFDWLQNDKQ 295

Query: 296 HT-------------ELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNR 342
           +              E  +RW F + H+G+  Q W+  +DY+KVSD NYF+DLDS  GN 
Sbjct: 296 YKNDVLSGKSGYAADENYNRWLFHWMHSGVVDQVWRINVDYTKVSDQNYFTDLDSVYGNT 355

Query: 343 EDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYL 402
            DG   Q+    Y + NWD+ L  R +Q+ +    +    YR MPQL  N+ A   +   
Sbjct: 356 TDGYATQKFSLGYATRNWDATLSTRQYQIFSN--LANRDVYRAMPQLDINF-AQNNIGPF 412

Query: 403 DLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQD----- 457
           DL L    ++F       P ATR HIEP L +P SN W + +TE +++ T+YQQ+     
Sbjct: 413 DLYLYGQAAKFTNVNPTYPDATRFHIEPTLSLPLSNGWASLSTETKLMATHYQQENLDTY 472

Query: 458 ----LDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLLDDYTQTLEPKIQYLYVPEKYQ 513
                D T    L+ SV RV+P+ ++   +V ERD      YTQTLEP+ QYLYVP + Q
Sbjct: 473 RDNHADNTDATSLKGSVNRVMPQFKTDGKLVFERDMDWAKGYTQTLEPRAQYLYVPYRDQ 532

Query: 514 DNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAFGQI 573
            +I  YDSTLLQ DY GLFR R +SG+DRI SANQVS G +TR +DS+ +ER N + GQI
Sbjct: 533 SSIRAYDSTLLQADYAGLFRERTFSGLDRIASANQVSTGVTTRLYDSSLEERFNASLGQI 592

Query: 574 FYLDSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTL 633
           +Y +     +    D + ++ S S WA +  + FAD     GG QYD   +   LG++ L
Sbjct: 593 YYFERPRTGTASTIDQSDNRGSLS-WAGDSYWKFADNWGIRGGAQYDQRLKDFTLGDAVL 651

Query: 634 EYR-VASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASG 692
           EYR      +Q NYR+ +  YI+  +  ++TN     + GISQ G  A + L+ +W+  G
Sbjct: 652 EYRGGGERMLQLNYRFASSKYIQAML-PTVTNPG--FQQGISQIGATASWPLTDRWAIVG 708

Query: 693 QYYYDLTTDEALEWLANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNI 752
            YYYD   ++  + L  L Y++ CW V   Y  ++  WN           +Y+N   F+ 
Sbjct: 709 AYYYDTKANQPADQLLGLQYSTCCWAVNVGYERKITIWNST-----TNQSVYDNKLGFSF 763

Query: 753 GIIGFGTSIGAGS 765
            + G  ++   G+
Sbjct: 764 ELRGLSSNYSLGT 776