Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Variovorax sp. SCN45

 Score =  181 bits (459), Expect = 4e-50
 Identities = 128/405 (31%), Positives = 199/405 (49%), Gaps = 19/405 (4%)

Query: 30  VAVIVNSGVILQSDVDSAL-KTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADR 88
           +  +VNS  I  ++V + + + IK N    + P  + T L   VL++LI +  Q Q A  
Sbjct: 61  IVALVNSEPITNTEVLTRVDRLIKENPDAERVPRNELTRL---VLDRLISERAQLQLAKE 117

Query: 89  IGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFREQVRKEMAASDARNALV 148
            G+K+D+  +++A + +A+ N+ +  +L   V  EGLT  EFR  +R ++  +  R+  V
Sbjct: 118 NGIKVDEVAIDQAEQTVARQNEISLTELRRRVIAEGLTQAEFRRDLRDQLLLTRLRDREV 177

Query: 149 RRRINILPAEVDTLAELLAQETDATVQYKISHIQLR---------VDDGQDKSTAETLAN 199
             ++ I  AE D    L+ Q   A     + ++ L            D Q  + A+  A 
Sbjct: 178 ESKVKISDAEADEY--LIDQRNVAVKNAALQNLNLAQVLVAVPETATDAQ-VAAAQKKAQ 234

Query: 200 KLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFR 259
            +    R G DFA++    S  P    GG  G    +  P++F D  +      I GP R
Sbjct: 235 DIAQRARAGEDFAKLVRENSDAPDRANGGAIGMRSADRYPSLFVDATQSTAVNGIAGPIR 294

Query: 260 SGVGFHILKI--DDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEV 317
           S  GFH+LK+      G     VT+   RHIL+      +   A  QL EF +R++ G  
Sbjct: 295 SSAGFHVLKVLAKAQIGSGDATVTQTQVRHILLLNDPKRTTAQAVAQLAEFKRRLQAGTA 354

Query: 318 TFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVE 377
            FA LA+  SQD GSA   GELG+  P  +VPEF+  ++ L  G+IS+P  +  G H+++
Sbjct: 355 DFAGLARDNSQD-GSAKDGGELGWSRPGQFVPEFEEAMDRLAPGEISDPVVSRFGVHLIQ 413

Query: 378 VLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVE 422
           V  RR+   T S  +  A   L  ++  E  S W+QE+RA A+VE
Sbjct: 414 VEGRRDAKLTQSEQREAARAALREKRVEEAFSTWVQEVRARAYVE 458