Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) from Variovorax sp. SCN45

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 282 EVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGY 341
           E  ARHIL++          + Q  + +  +K G   F ++A++ S+DPGS A  G+L +
Sbjct: 133 EYKARHILVE---------TEDQAKKILADLKKG-AKFEDIAKKQSKDPGSGANGGDLDW 182

Query: 342 QTPDLYVPEFKHQIETLPVGQIS-EPFKTVHGWHIVEVLDRRE 383
             P  +VPEF   +  L  G+ +  P KT  GWHI+ V D R+
Sbjct: 183 ANPASFVPEFSEAMIKLKKGETTPAPIKTQFGWHIIRVDDIRQ 225



 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 59/281 (20%), Positives = 111/281 (39%), Gaps = 50/281 (17%)

Query: 5   KPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQ 64
           K  ++  ++A  L  A      L   A IVN   + ++ +D   + + A  +      P 
Sbjct: 2   KKQILQAVAAAVLLGA-IPMAALAQNAAIVNGKPVPKARMDVLAQQLAAAGR------PV 54

Query: 65  ETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEG 124
              ++ Q+ E+++   +  QEA + G+   ++  N+                   +A++ 
Sbjct: 55  TPEMQGQLREEIVAREVFMQEAQKQGLDASEDYKNQL-----------------ELARQA 97

Query: 125 LTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLR 184
           +      +  RK    SDA           + AE D          +   +YK  HI + 
Sbjct: 98  ILIRALFDNYRKTNPISDAD----------VKAEYDKFVA-----ANGGKEYKARHILVE 142

Query: 185 VDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGP-KALQGGDWGWMRKEEMPTIFA 243
            +D          A K++ DL+ GA F  +A   SK P     GGD  W         F+
Sbjct: 143 TEDQ---------AKKILADLKKGAKFEDIAKKQSKDPGSGANGGDLDWANPASFVPEFS 193

Query: 244 D-QIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEV 283
           +  IK++   +   P ++  G+HI+++DD++  +   + EV
Sbjct: 194 EAMIKLKKGETTPAPIKTQFGWHIIRVDDIRQAQLPKLEEV 234