Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Periplasmic chaperone and peptidyl-prolyl cis-trans isomerase of outer membrane proteins SurA (EC 5.2.1.8) from Sphingobium sp. HT1-2

 Score =  113 bits (283), Expect = 1e-29
 Identities = 98/394 (24%), Positives = 181/394 (45%), Gaps = 12/394 (3%)

Query: 33  IVNSGVILQSDVDSALKTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADRIGVK 92
           IVN  +I  +DVD  L  I   A   K    ++  LR QVL  LI +TLQ QEA    +K
Sbjct: 67  IVNGRIITGTDVDQRLALI-ITANGGKVSAEEKERLRVQVLRNLIDETLQIQEAAANDIK 125

Query: 93  IDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFREQVRKEMAASDARNALVRRRI 152
           ID   +N++ + +A N +++  Q    + ++G +    + Q+  E+A S      ++  +
Sbjct: 126 IDPAEVNQSYERVAANFRKSPPQFDQYLREQGSSASSIKRQIEGELAWSRLLRRNIQPFV 185

Query: 153 NILPAEVDTLAELLAQETDATVQYKISHIQL-RVDDGQDKSTAETLANKLVNDLRNGADF 211
           N+   EV ++ + L      + + +IS I L    + +D+ TA   A  ++  ++ G  F
Sbjct: 186 NVSEDEVKSVVDRL-NAAKGSDEVRISEIYLSSTPENRDQITAN--ARNIIEQIKQGGSF 242

Query: 212 AQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDD 271
           A  A  +S+   A+ GGD GW+R  ++PT  A        G + GP  +  G  I+ + D
Sbjct: 243 AAYARQFSEASTAVVGGDLGWVRPSQLPTELAQAATELQVGQLAGPIETVGGMSIIYVMD 302

Query: 272 VKGLETVAVTE--VNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQD 329
            + + T    +  ++ + + +      S E A ++   F   +K  E+     A +    
Sbjct: 303 KRKVLTADPRDSLLSLKQLSVLFPAGTSKEAASQKAATFAAAVK--EIKGCGQANEIGAR 360

Query: 330 PGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVH-GWHIVEVLDRREVDRTD 388
            G+     +   +  DL  P+ +  +  L VG+ + PF +++ G  ++ V  R E    +
Sbjct: 361 IGADVVDND-NVKLRDL-PPQLQDILVNLQVGESTPPFGSINDGVRVLIVCGRDEPQSAN 418

Query: 389 SALKNKAYRILFNRKFNEEASAWLQELRASAFVE 422
           +    +    L   + N+ A  +L++LR  A +E
Sbjct: 419 APNPEQIQAQLEEERVNKRARIYLRDLRRDAVIE 452