Pairwise Alignments

Query, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., putative Peptidyl-prolyl cis-trans isomerase D from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 3e-26
 Identities = 99/381 (25%), Positives = 169/381 (44%), Gaps = 49/381 (12%)

Query: 8   LISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSAL-----KTIKANAKQNKQPL 62
           LI VL ALT F A  +       A  VN   I Q+++  A      + ++   K     L
Sbjct: 20  LIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAADMQRRQLMQQLGKDFDPAL 79

Query: 63  PQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAI---KEIAKNNQQTQEQLIAS 119
             + +LRE+ L+ LI   L  Q A+       +  L++ I    E   + + + E+    
Sbjct: 80  LDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVILQTPEFQVDGKFSAERFDQV 139

Query: 120 VAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETD-ATVQYKI 178
           + Q G    +FRE + +EM     R  L      +   +VD  A L  Q  D A++ +K 
Sbjct: 140 IRQMGYGRMQFREMLGEEMLIGQLRTGLAGSSF-VTDQQVDAFARLEKQTRDFASLTFKA 198

Query: 179 SHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEM 238
               ++V D + K+  +  A + ++  +   D+ ++                        
Sbjct: 199 DPAAVKVSDEEVKAHYDQHAKEFMSPDQVVIDYIELK----------------------- 235

Query: 239 PTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSD 298
            + F DQ+K+ ++               LK    K +  +A  + +A HILI+    ++D
Sbjct: 236 KSAFFDQVKVTDEE--------------LKAQYEKEIANLA-EQRHAAHILIEVNDKVTD 280

Query: 299 EGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETL 358
             A+ +  E  QR+  GE  FA LA+++SQDPGSA   G+LG+  P +Y P F+  +  L
Sbjct: 281 AQAKARAEEIEQRLAKGE-DFAALAKEFSQDPGSANTGGDLGFAGPGVYDPAFEEALYKL 339

Query: 359 PVGQISEPFKTVHGWHIVEVL 379
             GQ+S P +T  G+H++++L
Sbjct: 340 QDGQVSAPVRTEFGYHLIKLL 360



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 175 QYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGP-KALQGGDWGWM 233
           Q   +HI + V+D    + A+  A ++   L  G DFA +A  +S+ P  A  GGD G+ 
Sbjct: 264 QRHAAHILIEVNDKVTDAQAKARAEEIEQRLAKGEDFAALAKEFSQDPGSANTGGDLGFA 323

Query: 234 RKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLE 276
                   F + +     G +  P R+  G+H++K+  V+  E
Sbjct: 324 GPGVYDPAFEEALYKLQDGQVSAPVRTEFGYHLIKLLGVQAPE 366