Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., dimethyladenosine transferase from Magnetospirillum magneticum AMB-1

 Score =  139 bits (351), Expect = 5e-38
 Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 8/262 (3%)

Query: 8   GHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIEL 67
           G  ARK  GQ+FL D  +   I  A       +++EIGPG G +T  +  +     VI +
Sbjct: 15  GLDARKSLGQHFLFDLNLTGRIARAAGDLTVGSVIEIGPGPGGLTRAL-LDAGARQVIAI 73

Query: 68  DRD-LAERLRNHPELA--SKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFH 124
           +RD  A  ++N    A   +L I   DAM  D  +L +     R+  NLPYNIST L+  
Sbjct: 74  ERDDRAIAIQNEIAEAYPGRLEIMAADAMTVDAAELGEVPR--RIVANLPYNISTALLLG 131

Query: 125 LFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPP 184
                   + +  M QKEVV+RLAA P ++ YGRL+V+ Q+ C+V P+  V   AF PPP
Sbjct: 132 WLRRADAFERLVLMFQKEVVDRLAAPPRSEHYGRLSVITQWRCEVRPLFNVDRRAFTPPP 191

Query: 185 KVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPE-TLETLGIN 243
            V S VV L+P  +   PA   E L+RV    F QRRK +R+  K L   E  LE  GI 
Sbjct: 192 AVTSTVVDLIPRAEPLAPA-RFETLERVTAAAFGQRRKMLRSSLKSLGGAEDLLERTGIL 250

Query: 244 PGMRPENLTLAQFVALANWLDA 265
           P  R E + +  F ALA  LDA
Sbjct: 251 PTARAEEIPVEGFCALARALDA 272