Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  349 bits (896), Expect = e-101
 Identities = 173/264 (65%), Positives = 204/264 (77%), Gaps = 1/264 (0%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VH GH ARKRFGQNFLND ++ID IVSAINP+ GQ +VEIGPGL A+TEPVG  +D
Sbjct: 1   MNNRVHQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQL-VKPNNKLRVFGNLPYNIST 119
           K TVIELDRDLA RL+ HP L  KLTI++ DAM  +F +L  +    LRVFGNLPYNIST
Sbjct: 61  KLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVFGNLPYNIST 120

Query: 120 PLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSA 179
           PLMFHLF +   I DMHFMLQKEVVNRL AGP +K YGRL+VMAQYYC+V+PVLEVPPSA
Sbjct: 121 PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKEYGRLSVMAQYYCQVIPVLEVPPSA 180

Query: 180 FVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLET 239
           F PPPKVDSAVVRLVP+  +P+P   +  L R+  E FNQRRKT+RN    L   ETL  
Sbjct: 181 FTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVETLTE 240

Query: 240 LGINPGMRPENLTLAQFVALANWL 263
           +GI+P MR EN+++AQ+  +AN+L
Sbjct: 241 MGIDPAMRAENISVAQYCQMANYL 264