Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., ribosomal RNA small subunit methyltransferase A from Enterobacter asburiae PDN3

 Score =  344 bits (882), Expect = 1e-99
 Identities = 172/264 (65%), Positives = 201/264 (76%), Gaps = 1/264 (0%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VH GH ARKRFGQNFLND ++I+ IVSAINP+ GQ +VEIGPGL A+TEPVG  +D
Sbjct: 1   MTNRVHQGHLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEPVGERLD 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLV-KPNNKLRVFGNLPYNIST 119
           + TVIELDRDLA RL+ HP L  KLTI++ DAM  +F +L  K    LRVFGNLPYNIST
Sbjct: 61  ELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNIST 120

Query: 120 PLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSA 179
           PLMFHLF +   I DMHFMLQKEVVNRL AGP +KAYGRL+VMAQYYC V+PVLEVPPSA
Sbjct: 121 PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSA 180

Query: 180 FVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLET 239
           F PPPKVDSAVVRLVP++  P+P   L  L R+  E FNQRRKT+RN        E L  
Sbjct: 181 FTPPPKVDSAVVRLVPHKTKPYPVKDLRVLSRITTEAFNQRRKTIRNSLSNSFTVEVLAE 240

Query: 240 LGINPGMRPENLTLAQFVALANWL 263
           LGI+P MR EN+++ Q+  LAN++
Sbjct: 241 LGIDPAMRAENISVEQYCKLANYI 264