Pairwise Alignments

Query, 271 a.a., ribosomal RNA small subunit methyltransferase A from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Dickeya dianthicola ME23

 Score =  347 bits (890), Expect = e-100
 Identities = 174/266 (65%), Positives = 204/266 (76%), Gaps = 1/266 (0%)

Query: 1   MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVD 60
           M N VH GH ARKRFGQNFLND ++ID IVSAI+P+PGQ +VEIGPGLGA+T PVG  +D
Sbjct: 1   MNNRVHQGHFARKRFGQNFLNDQFVIDSIVSAIHPQPGQAIVEIGPGLGALTIPVGERID 60

Query: 61  KFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNK-LRVFGNLPYNIST 119
           +FTV+ELDRDLA RL  HP L  KLTI + DAM  DF  L +   + LRVFGNLPYNIST
Sbjct: 61  RFTVVELDRDLAARLEVHPTLKDKLTIIQQDAMTVDFAALSQQAGQPLRVFGNLPYNIST 120

Query: 120 PLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSA 179
           PLMFHLF +   I+DMHFMLQKEVVNRL AGP +KAYGRL+VMAQYYC+V+PVLEVPP+A
Sbjct: 121 PLMFHLFSYTLAIRDMHFMLQKEVVNRLVAGPDSKAYGRLSVMAQYYCRVIPVLEVPPTA 180

Query: 180 FVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLET 239
           F P PKVDSAVVRLVP+   P+PA +   L R+  E FNQRRKT+RN    L  PE L  
Sbjct: 181 FKPAPKVDSAVVRLVPHATSPYPAVNTRILGRITTEAFNQRRKTLRNSLGNLFTPEQLTA 240

Query: 240 LGINPGMRPENLTLAQFVALANWLDA 265
           L ++P +R EN+T+AQ+  LA WL A
Sbjct: 241 LEVDPNIRAENVTIAQYCRLAEWLTA 266