Pairwise Alignments

Query, 289 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., FIG023911: putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  250 bits (638), Expect = 3e-71
 Identities = 127/265 (47%), Positives = 179/265 (67%), Gaps = 5/265 (1%)

Query: 30  LGFRKGIM----ESKQRAVSRLIAQAGQMLLAHGAESTLVGDIMRRMGLASGMSEVEVSL 85
           + FR G +    +S QRAV+RL  Q G  LL HGAES LV ++  R+GLA GM  VE ++
Sbjct: 49  MSFRTGRVMQEEQSIQRAVTRLCIQCGLFLLQHGAESALVDELSTRLGLALGMDSVESAI 108

Query: 86  SASSLVVTTVYKEHCITTARRSPDRGINMRVVTQIQRICIMMEKGILDHSLAQRKLNHIS 145
           S++++V+TT+    C+T+ R++ DRGINM VVT++Q I I+ E  +LD+   +++ + + 
Sbjct: 109 SSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGVEKRFSQLR 168

Query: 146 PERYNRWLVVVMIGLSCAAFSRLAGGDWMVFLITLIASSVGMIVRQEIGHRQFNPLINFA 205
           P RY RWLV  M+GLSC+ F +L  G W   +IT  AS + M +RQ +  R  +P INF 
Sbjct: 169 PLRYPRWLVAFMVGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFC 228

Query: 206 ATAFVTSVISA-QAVIYQLGNKPTIVMASSVLMLVPGFPLINAVADMLKGYINMGIARFV 264
            TAFV + IS     +      PTI MA+SVL+LVPGFPLIN+VADM KG+IN G+AR+ 
Sbjct: 229 ITAFVATTISGLMLTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWA 288

Query: 265 MASLLTLATALGIVAAMSITGIWGW 289
           +ASLLTLAT +G+V +M++ G+ GW
Sbjct: 289 IASLLTLATCVGVVMSMTVWGLRGW 313