Pairwise Alignments

Query, 289 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., putative structural protein (VIMSS) from Escherichia coli BW25113

 Score =  251 bits (642), Expect = 9e-72
 Identities = 127/251 (50%), Positives = 174/251 (69%), Gaps = 1/251 (0%)

Query: 40  KQRAVSRLIAQAGQMLLAHGAESTLVGDIMRRMGLASGMSEVEVSLSASSLVVTTVYKEH 99
           +QRAV+RL  Q G  LL HGAES LV ++  R+G A GM  VE S+S++++V+TT+    
Sbjct: 5   QQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQ 64

Query: 100 CITTARRSPDRGINMRVVTQIQRICIMMEKGILDHSLAQRKLNHISPERYNRWLVVVMIG 159
           C+T+ R++ DRGINM VVT++Q I I+ E  +LD+   +++ + I P RY RWLV +M+G
Sbjct: 65  CLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVG 124

Query: 160 LSCAAFSRLAGGDWMVFLITLIASSVGMIVRQEIGHRQFNPLINFAATAFVTSVISAQAV 219
           LSCA F +L  G W   +IT  AS+  M +RQ +  R  +P INF  TAF  + IS   +
Sbjct: 125 LSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLL 184

Query: 220 -IYQLGNKPTIVMASSVLMLVPGFPLINAVADMLKGYINMGIARFVMASLLTLATALGIV 278
            +    N PTI MA+SVL+LVPGFPLINAVADM KG+IN G+AR+ +ASLLTLAT +G+V
Sbjct: 185 QLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVV 244

Query: 279 AAMSITGIWGW 289
            A++I G+ GW
Sbjct: 245 MALTIWGLRGW 255