Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 10/244 (4%)

Query: 42  GGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATA 99
           GGGKRLRPLL   +                 IE IH  +L+HDD+  +D  D+RRGK T 
Sbjct: 49  GGGKRLRPLLVQATCDLFNISRESALRVGLAIECIHVYSLVHDDLPAMDNDDMRRGKPTV 108

Query: 100 NAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQ------QLMNC 153
           + AF  A ++L GD ++  +F+++ +  +     +  D V  +A           Q+M+ 
Sbjct: 109 HKAFDEATAILAGDCLHDLAFEILADEQTHPDAFVRIDLVKALAVASGPAGMAGGQMMDL 168

Query: 154 NDPDTTE--ASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 211
               T    A+  ++   KT  L        AI+     E    +  Y + +G AFQ+ D
Sbjct: 169 EAEKTRFDLATVTRLQNLKTGALIGFCVDAAAIMARIPVEARTGLHGYARDIGLAFQIAD 228

Query: 212 DVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEI 271
           D++D   D    GK +G D A GK T   L  +     +   ++ +A    +G     ++
Sbjct: 229 DLLDVEGDAALAGKALGKDAAAGKETFVSLLGVDRAREQGRLLVEQAKAHLHGHGAEADL 288

Query: 272 LAAM 275
           L A+
Sbjct: 289 LRAI 292