Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., polyprenyl synthetase family protein from Magnetospirillum magneticum AMB-1

 Score =  121 bits (304), Expect = 2e-32
 Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 15/270 (5%)

Query: 1   MDFKAIQALTANDMAKVNETIHAQL---NSDVSLINQLGFYIISGGGKRLRPLLAVLSAK 57
           M  +  +ALT    A VN  +   L    S  S +++   Y+   GGKRLRP L + SA 
Sbjct: 1   MSPRLTEALTVVSQA-VNSELDRLLPVSESPDSRVHEAMRYVTLDGGKRLRPFLVMQSAS 59

Query: 58  ALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFI 115
                 S     A  IE IH  +L+HDD+  +D+ DLRRG+ T + AF  A ++L GD +
Sbjct: 60  LFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLAGDAL 119

Query: 116 YTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLM--------NCNDPDTTEASYMQVI 167
            T++F+++    +     +  + V  +A     Q M          +  D   A   ++ 
Sbjct: 120 LTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGITRLQ 179

Query: 168 YSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNV 227
             KT RLF  + + GA+L  A  E+ LA++NY   LG AFQ+ DD++D   D  E+GK V
Sbjct: 180 QLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDVAEVGKRV 239

Query: 228 GDDLAEGKPTLPLLYAMQHGNPEQAAMIRE 257
             D   GK T   L  ++     QA M+ E
Sbjct: 240 NKDADAGKATFVSLLGLERAK-SQADMLAE 268