Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., polyprenyl synthetase family protein from Magnetospirillum magneticum AMB-1

 Score =  299 bits (765), Expect = 7e-86
 Identities = 159/321 (49%), Positives = 219/321 (68%), Gaps = 1/321 (0%)

Query: 3   FKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQ 62
           F A+ AL  +D+ KVN  I  +++S V +I QL  +II+ GGKRLRP+L + SAK  G+ 
Sbjct: 18  FDALVALVKDDLQKVNHAIVDRMHSPVEMIPQLAGHIIAAGGKRLRPVLTLASAKLAGHT 77

Query: 63  GSHHTTAAAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQM 122
           G  H   AA +EFIHTATLLHDDVVDES+LRRG+A+ANA FGN  SVLVGDF+++RSF++
Sbjct: 78  GERHIKLAACVEFIHTATLLHDDVVDESELRRGQASANALFGNKPSVLVGDFLFSRSFEL 137

Query: 123 MTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIG 182
           M E GS+ +L ++S A +VIAEGEV QL+  ND +T+E SY++VI SKTA LF AA +IG
Sbjct: 138 MVEDGSLSVLAILSRASSVIAEGEVLQLITANDTETSEDSYLEVIRSKTAALFAAACRIG 197

Query: 183 AILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLY 242
           A++ D     E A+++YG  LG AFQLIDDV+DY++    +GK VGDD  EGK TLP++ 
Sbjct: 198 AVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSAKQAVLGKTVGDDFREGKITLPVIL 257

Query: 243 AMQHGNPEQAAMIREAIEKANGMSR-LNEILAAMEQTGSLQYTIEKALHEADKAIAELAI 301
           A + G  E+ A  R  +E+ +     + + +  ME+ GSL  TI +A H  + A   L I
Sbjct: 258 AFRRGGDEERAFWRRCLEELDQSDEDIGQAIKLMEKHGSLAATIARARHYGEIARDALGI 317

Query: 302 LPESEYKQALITLAHMAVNRS 322
            P+S  KQA+I +    ++R+
Sbjct: 318 FPDSPVKQAMIDVIDFCIDRA 338