Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., polyprenyl synthetase family protein from Erwinia tracheiphila SCR3

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 26  NSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDD 85
           N D + +++   Y    GGKR R LL            S      A IE +H  TL+HDD
Sbjct: 20  NDDGTCLSEAMRYATLQGGKRTRALLTKAVGALNDTPASLLDEIGAAIEMMHACTLVHDD 79

Query: 86  V--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELG-----SMKILKLMSDA 138
           +  +D+  LRRG  T +  F  A ++LVGD +   +F  +T+L       + +++ ++ A
Sbjct: 80  LPAMDDDVLRRGLPTVHVKFDEATAILVGDALQAHAFLTLTQLAIPAENRIALIQELARA 139

Query: 139 VNV--IAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAI--LCDASPEVEL 194
           V+    A G+   L         E   +++   K+  L  A+ ++GA+  + D +   EL
Sbjct: 140 VSTEGAAGGQAIDLAIVGKSVPLE-HIIKMHAMKSGALVRASVRMGALCTVIDDTEHREL 198

Query: 195 --AMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQA 252
             A+  Y   +G A Q+ DD++D T+D   +GK  G D A  KPT   L  +       +
Sbjct: 199 YDALDRYSAAIGLALQITDDILDATADTATLGKTAGKDAAAQKPTCASLMGINAARSLAS 258

Query: 253 AMIREA 258
            +  EA
Sbjct: 259 DLFHEA 264