Pairwise Alignments

Query, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) from Acinetobacter radioresistens SK82

 Score =  287 bits (734), Expect = 3e-82
 Identities = 150/323 (46%), Positives = 218/323 (67%), Gaps = 4/323 (1%)

Query: 1   MDFKA-IQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKAL 59
           +DFK  I A  A D A +++ I+  ++S V+L+  +  +++  GGKR+RP++ +L+A A 
Sbjct: 3   IDFKQDILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYAC 62

Query: 60  GYQGSHHTTA-AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTR 118
           G     H    AA IE +HTATL+HDDVVDES LRRG+ TANA + N  +VLVGDF+  R
Sbjct: 63  GETNLKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIAR 122

Query: 119 SFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAA 178
           +F ++ +L +M +LK  S     IAEGEV QL   + PDTTEA Y+Q+I+ KT+RLFE A
Sbjct: 123 AFDLLVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEAVYLQIIHGKTSRLFELA 182

Query: 179 TQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTL 238
           T+ GA +    PE    ++ +  + G AFQ+IDD++DYTSD D +GKN+GDDL EGKPTL
Sbjct: 183 TE-GAAILAGKPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTL 241

Query: 239 PLLYAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAE 298
           PL+ AMQ+   EQ  +IR +I    G S+L +++A ++ +G+L Y  ++A  E ++A+  
Sbjct: 242 PLIAAMQNTQGEQRDLIRRSI-ATGGTSQLEQVIAIVQNSGALDYCHKRATEETERALQA 300

Query: 299 LAILPESEYKQALITLAHMAVNR 321
           L ILPES Y+QAL+ L  +A++R
Sbjct: 301 LEILPESTYRQALVNLTRLALDR 323