Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., amino acid APC transporter from Pseudomonas simiae WCS417

 Score =  437 bits (1124), Expect = e-127
 Identities = 230/470 (48%), Positives = 312/470 (66%), Gaps = 12/470 (2%)

Query: 4   KLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVN 63
           KL LG+L ALV+GSMIG G+FSLPQNMAA A   AV+IGW IT +GM+ LA  FQ LA  
Sbjct: 7   KLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAVLIGWVITAVGMLTLAFVFQTLANR 66

Query: 64  KPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFG 123
           KP ++ GV+ +A+ GFGD+ GF SAWGYW SA + NV Y V++FSTLG  F      IFG
Sbjct: 67  KPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFP-----IFG 121

Query: 124 SGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTF 183
            GNT  ++ GAS+LLWAVH LVLRG++ AA INL+TT+ K+VPL+LF++ A+ AF    F
Sbjct: 122 EGNTPAAVIGASVLLWAVHFLVLRGIKEAAFINLVTTVAKVVPLVLFVLIALFAFKLDIF 181

Query: 184 SLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLTA 243
           + D  GL +     ++ QV+  ML+TVWVF+GIEGA + S+RA +R D+G+AT++G +T 
Sbjct: 182 TADIWGLKNPDLGSVMNQVRNMMLVTVWVFIGIEGASIFSARAEKRSDVGKATVIGFITV 241

Query: 244 LSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSWT 303
           L   +LV +LS+G++   +LA+  NPSMA VL  ++G WG  +I+VGL+IS+ GA LSW 
Sbjct: 242 LLFLMLVNVLSLGIMTQPELAKLQNPSMAAVLEHVVGHWGAVLISVGLVISLLGALLSWV 301

Query: 304 VLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLIF 363
           +L +E  F AAKD   P    K+N    P NAL+LT   +Q+ L++  +++STY SL+  
Sbjct: 302 LLCAEIMFAAAKDHTMPEFLRKENANHVPANALWLTNAMVQIFLVITLFSASTYLSLIYL 361

Query: 364 ASEMILVPYFLVGAFTLKLALE-------QRDRGKLLLIGFGATAYGLWLLYASGLHYLM 416
           A+ MILVPY    A+ L LA+         ++R K L IG  A  Y +WLLYA G  YL+
Sbjct: 362 ATSMILVPYLWSAAYALLLAVRGETYENALKERQKDLFIGAIALIYAVWLLYAGGTKYLL 421

Query: 417 LSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAGMLWQG 466
           LS LLY PG   + KAKRE G   F   E +  + +++ A+ AA  L+ G
Sbjct: 422 LSALLYAPGAILFAKAKRELGKPIFTNVEKLIFAAVIIGALVAAYGLYDG 471