Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., amino acid APC transporter from Pseudomonas simiae WCS417

 Score =  428 bits (1101), Expect = e-124
 Identities = 236/471 (50%), Positives = 309/471 (65%), Gaps = 12/471 (2%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           +KL L +L ALV+GSMIG G+FSLPQNMAA A   AV+IGW+IT +GM+ LA  FQ LA 
Sbjct: 6   QKLRLSALIALVVGSMIGGGIFSLPQNMAARAEVGAVLIGWAITAVGMLTLAFVFQTLAN 65

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
            KP ++SGV+ +A+ GFGD+ GF SAWGYW SA + NV Y V++FSTLG  F      IF
Sbjct: 66  RKPELDSGVYAYAKAGFGDYMGFSSAWGYWISAWMGNVGYFVLLFSTLGYFFP-----IF 120

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
           G GNT  +IG ASLLLWAVH LVLRG++ AA IN ITT+ K+VPLL+FIV A  AF    
Sbjct: 121 GQGNTPVAIGCASLLLWAVHFLVLRGIKEAAFINQITTVAKIVPLLMFIVIAGVAFKAEI 180

Query: 183 FSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQRKDIGRATILGLLT 242
           F+ D  G+ + +  +++ QV+  ML+TV+VF+GIEGA V S+RA +R D+GRAT++G L 
Sbjct: 181 FTRDIWGVGNPNMGNVVDQVRNMMLVTVFVFIGIEGASVYSARAEKRSDVGRATVIGFLG 240

Query: 243 ALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLSW 302
            L++ VLV +LS+G++   QLAQ  NPS+A VL  I+GPWG   I++GL +S+ GA LSW
Sbjct: 241 VLALLVLVNVLSLGIMSQPQLAQLQNPSLAGVLEHIVGPWGAMAISIGLAVSLLGALLSW 300

Query: 303 TVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSSTYDSLLI 362
            +L +E  +  A DK  P    K+N    PVNAL+LT + IQV L++  ++ STY +L+ 
Sbjct: 301 ALLCAEILYATAHDKTMPAFLKKENANQVPVNALWLTNVMIQVFLVITLFSHSTYTTLIY 360

Query: 363 FASEMILVPYFLVGAFTLKLALE-------QRDRGKLLLIGFGATAYGLWLLYASGLHYL 415
            AS MILVPY    A+ + L+            R K LL+G  A  Y +WLLYA GL YL
Sbjct: 361 LASSMILVPYLWSAAYAVLLSGRGETYQGAHGQRIKDLLVGLIALGYAVWLLYAGGLKYL 420

Query: 416 MLSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVGAAGMLWQG 466
           +LS LLY PG   +  AKREQ    F   E    S ++  A  AA  L+ G
Sbjct: 421 LLSALLYAPGVILFALAKREQDQPLFTHVEKGIFSCVIAGAGLAAYGLYSG 471