Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., gamma-aminobutyrate transporter from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 101/463 (21%), Positives = 199/463 (42%), Gaps = 50/463 (10%)

Query: 10  LTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAVNKPHVNS 69
           +T L I  +IGAG+F    +  A A P AV++ ++  G  ++ +      +AV  P  ++
Sbjct: 19  VTMLSIAGVIGAGLFVGSGHAIAAAGP-AVLLAYAAAGTLVVLVMRMLAEMAVASP--DT 75

Query: 70  GVFG-FAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIFGSGNTW 128
           G F  +A    G +AGF   W YW+        + V+V         T     F     W
Sbjct: 76  GSFSTYADRAIGHWAGFTIGWLYWW--------FWVLVIPLEANAAATILHAWFPDIAIW 127

Query: 129 WSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWSTFSLDFA 188
                 +LLL A +   L  V+          + K+V ++ F++  +AA      +   +
Sbjct: 128 VFTLVITLLLTATN---LFSVKNYGEFEFWFALIKVVAIVGFVILGLAAIFGFLPTSQVS 184

Query: 189 GLHHISGA-----DLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDIGRAT-----I 237
           G+ H+        + +G V A +L T++ F+G E   + ++ ++   + I +AT      
Sbjct: 185 GVSHLFDTQGFMPNGMGAVLAAILTTMFSFMGTEIVTIAAAESKNPGQQITKATNSVIWR 244

Query: 238 LGLLTALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCG 297
           +GL   LSI+++V+L+      +  +  Y       VL  +  P  K I+ + +L++V  
Sbjct: 245 IGLFYLLSIFIVVSLVPWNDPTLAAVGSYQT-----VLERMGIPNAKLIVDLVVLVAVTS 299

Query: 298 AFLSWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYT--SS 355
              S    AS   F   +    P    + N++G+P  A+ L+T    ++ +   Y   ++
Sbjct: 300 CLNSALYTASRMLFSLGRRGDAPAVAKRTNKSGTPYWAVLLSTGAAFLA-VFANYVAPAA 358

Query: 356 TYDSLLIFASEMILVPYFLVGAFTLKLALEQRDRGKLLLIGFGATAYGLWLLYASGLHYL 415
            ++ LL  +  + L+ Y ++    L++  ++   G+ ++       + +WL    GL Y 
Sbjct: 359 VFEFLLASSGAIALLVYLVIAVSQLRMRQKRTAAGEKIV-------FKMWLF--PGLTYA 409

Query: 416 MLSTLLYVPGFAFYLKAKREQGVKAFCGREMVGASTLLLFAVG 458
           ++  ++       + +A R + +         G  +LL+ A G
Sbjct: 410 VMVFIVGTLTIMLFQEAHRIEII-------ATGVLSLLVVAAG 445