Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 94/446 (21%), Positives = 180/446 (40%), Gaps = 38/446 (8%)

Query: 1   MDKKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYL 60
           + ++LG   +  + +G+ IG G+F        +A P A+M+ + I G+ ++ +  +   +
Sbjct: 18  LKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGP-AIMLSYIIGGLAILVIMRALGEM 76

Query: 61  AVNKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLF-DTPDQ 119
           AV+ P V      +A++  G  AGF + W YWF  +V  V+ +  V   +G+ F DTP  
Sbjct: 77  AVHNP-VAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTPRW 135

Query: 120 IIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIA--- 176
           I        W++      L ++ S+ L  V+          + K+V ++  ++  +    
Sbjct: 136 I--------WALAA----LISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIA 183

Query: 177 -AFNWSTFSLDFAGLHHISG--ADLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDI 232
             F     +L  + L    G   + +  V  ++ + ++ ++G+E   + +  A+  +K I
Sbjct: 184 FGFGNDGVALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTI 243

Query: 233 GRATILGLLTALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQV----LTTIIGPWGKYIIA 288
             A        L  YV    + + +   N++    +P +       + T  G     +I 
Sbjct: 244 PSAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVIT 303

Query: 289 VGLLISVCGAFLSWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLI 348
             L     G F +  +L S      A++   P  FAK +  G P  AL L+   + + ++
Sbjct: 304 AALSSCNGGIFSTGRMLYS-----LAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVL 358

Query: 349 LVRYTSSTYDSLLIFASEMILVPYFLVGAFTLKLALEQRDRGKLLLIGFGATAYGLWLLY 408
           L            +F     +  +  +  + + L  + + R  L         Y +WL  
Sbjct: 359 LNYLVPEK-----VFVWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYP 413

Query: 409 ASGLHYLMLSTLLYVPGFAFYLKAKR 434
            S   YL L+ LL V G   Y    R
Sbjct: 414 VSS--YLALAFLLLVVGLMAYFPDTR 437