Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (269), Expect = 5e-28
 Identities = 104/380 (27%), Positives = 172/380 (45%), Gaps = 26/380 (6%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           KK+GL + T +V G+M+G+G+  LP  +A+V S    +  W I  +G + LA  F  LA 
Sbjct: 6   KKIGLIACTGVVAGNMMGSGIALLPSTLASVGS--ISIYSWLICIVGALSLAFVFARLAT 63

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
             P    G   +A E    F GF +   Y+ +  + N++  +   S L + F   +  I 
Sbjct: 64  KNPQ-EGGPIAYAGEVSPVF-GFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIP 121

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
               T  S+     L   V+ L    V     I L+        L+L  V   A F W+ 
Sbjct: 122 AGLATIASVW----LFTLVNLLGGSWVSRLCTIGLV--------LILIPVVGTALFGWTH 169

Query: 183 F-SLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDIGRATILGL 240
           F S  ++   ++S       V   +LI +W FVG+E A V S      ++ +  AT+LG 
Sbjct: 170 FDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGT 229

Query: 241 LTALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFL 300
             A  IYVL T +  G+   +++A    P  A   T + G W    ++    ++   +  
Sbjct: 230 GLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSLG 288

Query: 301 SWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFL-TTLCIQVSLILVRYTSST--- 356
           SW +L  EA   AA D  FP+ F + ++ G P   L + +++   + L+L+ ++S T   
Sbjct: 289 SWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHA 348

Query: 357 ---YDSLLIFASEMILVPYF 373
              ++ L   A  + ++PYF
Sbjct: 349 SDLFNQLTTDAVLLTMLPYF 368