Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Lysine-specific permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 95/396 (23%), Positives = 156/396 (39%), Gaps = 61/396 (15%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           ++L    LT + IG  IG G+F       + A P   +  + + G+ + FL  S   LA 
Sbjct: 15  RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALFSYILIGLMVYFLMTSLGELAA 74

Query: 63  NKPHVNS-GVFG--FAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLF-DTPD 118
             P   S   +G  +  EGFG    F   W YW++  V     LV     +G  F DTP 
Sbjct: 75  YMPVSGSFATYGQNYVEEGFG----FALGWNYWYNWAVTIAVDLVAAQLVMGWWFPDTPG 130

Query: 119 QIIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAF 178
            I        WS    +L L  +  L    V+         ++ K+  +++FI+  +A  
Sbjct: 131 WI--------WS----ALFLCVIFLLNYISVRGFGEAEYWFSLIKVATVIIFIIVGVAMI 178

Query: 179 -------------NWSTFSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSR 225
                        NW+T    FAG      A ++G      +I  + F G E   + +  
Sbjct: 179 IGIFKGVEPVGWSNWTTGDAPFAG----GFAAMIG----VAMIVGFSFQGTELIGIAAGE 230

Query: 226 ARQ-RKDIGRATILGLLTALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQ--VLTTIIGPW 282
           +    K+I RA        L  YV   L+      ++ +  Y +P++ +  V    + P+
Sbjct: 231 SENPEKNIPRAVRQVFWRILLFYVFAILI------ISLIIPYTDPNLLRNDVKDISVSPF 284

Query: 283 GKYIIAVGLL--ISVCGAFLSWTVLASEAPFLAAKDKMF---------PRHFAKQNQAGS 331
                  GLL   ++  A +   VL++    + A  +M          PR FAK ++ G 
Sbjct: 285 TLVFQHAGLLSAAAIMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGV 344

Query: 332 PVNALFLTTLCIQVSLILVRYTSSTYDSLLIFASEM 367
           P NAL+ TT+   +  +   + + T    L+  S M
Sbjct: 345 PRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGM 380