Pairwise Alignments

Query, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., predicted lysine/cadaverine transporter (NCBI) from Escherichia coli BW25113

 Score =  105 bits (262), Expect = 3e-27
 Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 24/379 (6%)

Query: 3   KKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLAV 62
           KK+GL + T +V G+M+G+G+  LP N+A++      + GW I+ IG + LA  +  LA 
Sbjct: 5   KKIGLFACTGVVAGNMMGSGIALLPANLASIGG--IAIWGWIISIIGAMSLAYVYARLAT 62

Query: 63  NKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFDTPDQIIF 122
             P    G   +A E    F GF +   Y+ +  + N++  +   S L   F   +  + 
Sbjct: 63  KNPQ-QGGPIAYAGEISPAF-GFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPV- 119

Query: 123 GSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAFNWST 182
                    G A + +  V + V   +     ++ +TT+  ++ L+  +++AI  ++W  
Sbjct: 120 -------PAGIACIAIVWVFTFV--NMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFD 170

Query: 183 FSLDFAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRARQ-RKDIGRATILGLL 241
            +   A  +     D    +K+ +L+ +W FVG+E A V +   +  ++ +  AT+LG  
Sbjct: 171 AATYAANWNTADTTDGHAIIKS-ILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTG 229

Query: 242 TALSIYVLVTLLSMGVIQVNQLAQYPNPSMAQVLTTIIGPWGKYIIAVGLLISVCGAFLS 301
            A  +Y+  T +  G+   + +A    P  A   +TI+G W   +++     +   +  S
Sbjct: 230 LAGIVYIAATQVLSGMYPSSVMAASGAP-FAISASTILGNWAAPLVSAFTAFACLTSLGS 288

Query: 302 WTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYTSST----- 356
           W +L  +A   AA D  FP+ + + +  G P   L L  + +   +IL+   +S      
Sbjct: 289 WMMLVGQAGVRAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKAS 348

Query: 357 --YDSLLIFASEMILVPYF 373
             +  L   A  + ++PYF
Sbjct: 349 DLFGELTGIAVLLTMLPYF 367