Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., TRAP transporter solute receptor, TAXI family precursor from Variovorax sp. SCN45

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 67/320 (20%), Positives = 120/320 (37%), Gaps = 33/320 (10%)

Query: 12  IIKMGAIAAAVIGSGVAS-------AQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHN 64
           I   G I   VIG  VA+           +T+ TG     Y   G    + +    K   
Sbjct: 18  IASAGPIVFIVIGLLVAAYWWLQPQPPKHVTLATGPTGSAYAQFGKHYAEAL----KRAG 73

Query: 65  IRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHT 124
           I   ++ T GS  N+  +R+G  D G V+         G S          L ++ S+  
Sbjct: 74  IEVELKPTSGSTENLQLLRTGGADVGFVR---------GGSADPVADEEAGLTSLGSLFF 124

Query: 125 EPFNIIARADSG---------IENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSF 175
           EP  +  RADS          + ++  L G RVN+  PGSG    M+ ++ A     D  
Sbjct: 125 EPIWLFYRADSAQKIDKKTGTLTSLTQLRGLRVNVDLPGSGLPDIMERMLKANRLGPDDL 184

Query: 176 KLAAELKGSERSQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANN 235
            L + L+ +  ++AL    +DA +      +  ++    S   KL+     + +      
Sbjct: 185 -LLSNLEQAAAAEALQAGLLDAIVLSSAPQSPQVQHLLRSDDIKLMDF--GQADAYSRRF 241

Query: 236 PYYAYSVVPAGMYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPA 295
           P+ +   +P G+     +++    V+    TT  +S    +   + +F            
Sbjct: 242 PFLSAVTLPRGVVD-LAKDLPPHDVSLLAATTSLLSRDATHPALRQLFAQSAQTLHSGAG 300

Query: 296 FANLKKEDMVTAGNSIPLHP 315
           + N  ++   T  + +P+ P
Sbjct: 301 WFNRARDFPNTRTSELPVSP 320