Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., TAXI family TRAP transporter solute-binding subunit from Paraburkholderia sabiae LMG 24235

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 13/294 (4%)

Query: 18  IAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSIY 77
           IA+ V+ +  A++  +  I TG   G Y   G  + K V +      I   V  + GS  
Sbjct: 17  IASLVVAATPATSAHY-KIVTGQERGTYIQIGADLAKYVAQPA---GIDLEVMPSKGSAE 72

Query: 78  NVNTIR-SGELDFGIVQSD-WQYHGYNGTSEFAEQGP-YKKLRAVFSMHTEPFNIIARAD 134
           NV  +R    +   +VQSD +Q +     S  A+ G   + LR +  ++ E    + R D
Sbjct: 73  NVQRMRFEPGVKLALVQSDVYQAYLDMANSGNADAGTTIRPLRLIMPLYNEEIYFVVRND 132

Query: 135 SGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNK 194
           S ++ + ++  K ++IG  GSG   +   +           +    L   +   AL   K
Sbjct: 133 SPMKTINEIKDKVISIGPIGSGTAQSATTLYHLMFNQAIPEQNVQSLSNEDAIAALVVKK 192

Query: 195 IDAFIYMVGHPNGAIKEATTSCAAKL-VPATGPEI-EKIVANNPYYAYSVVPAGMYSGTD 252
           ID  + + G P     +      +++ +    P + E   A   Y+  ++  +   +   
Sbjct: 193 IDVAVIVAGQPAKLFTDMNPDLLSQIRILRLDPNVSETTRAKETYFPATIRQSSYPNWLK 252

Query: 253 QEVKSFGVAATLVTTEEVSEAVVYNLTK---AVFENFDTF-TRLHPAFANLKKE 302
            +V +  V A LVT +      V NL +   ++ ENFDT   + HP +  +K E
Sbjct: 253 DDVPTLTVKAFLVTYDYGLRDTVSNLNRFADSLCENFDTLQEKGHPKWKQVKLE 306