Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., TRAP transporter solute receptor, TAXI family precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  350 bits (897), Expect = e-101
 Identities = 168/322 (52%), Positives = 219/322 (68%), Gaps = 2/322 (0%)

Query: 9   LPKIIKMGAIAAAVIG--SGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIR 66
           +P  +   A AAA++   +   + Q F+TIGTG VTGVYY  GGAIC+LVNKDR  H IR
Sbjct: 4   IPLSLSTLATAAALMTPMAPAQAQQKFMTIGTGGVTGVYYAAGGAICRLVNKDRARHGIR 63

Query: 67  CSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEP 126
           CSVESTGGS++NVNTI++GELD G  QSD Q++   G  +F + G Y  LRAVF++H EP
Sbjct: 64  CSVESTGGSVFNVNTIKAGELDLGFTQSDVQFNALKGVGQFKDAGAYGDLRAVFAVHPEP 123

Query: 127 FNIIARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSER 186
           F ++AR ++ I   +D  GKR N+GNPGSG R++M+ ++   GW    F LA+ELK  E 
Sbjct: 124 FTVVARKEANITKFEDFKGKRFNVGNPGSGTRSSMEELLAGMGWKLSDFSLASELKADEH 183

Query: 187 SQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPAG 246
             ALCD KID F Y VGHP+  I++ TTSC AKLV  TGP ++K+VA  PYYA   +P G
Sbjct: 184 GPALCDGKIDGFYYAVGHPSANIQDPTTSCGAKLVSITGPAVDKLVAEKPYYAKVTLPGG 243

Query: 247 MYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMVT 306
           +Y    Q  +++GV+AT+V + + S   VY + KAVF+NFD F +LHPA ANL  E MV 
Sbjct: 244 LYPNNPQPTQTYGVSATVVASSKTSAETVYQVVKAVFDNFDEFKKLHPALANLTPEGMVK 303

Query: 307 AGNSIPLHPGAVKYYKEAGLIK 328
            G S PLH GA+K+YKE G +K
Sbjct: 304 DGLSAPLHEGALKFYKEKGWVK 325