Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TRAP transporter solute receptor, TAXI family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 22/177 (12%)

Query: 32  DFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNIRCSVESTGGSIYNVNTIRSGELDFGI 91
           D + + TG     Y   G    + + ++     I   +  + GS  N+  +R+G+ D G 
Sbjct: 43  DRVVLATGPAQSAYEAFGKRYAEALARN----GITVELLPSEGSSANLELLRTGQADLGF 98

Query: 92  VQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTEPFNIIARADSG--------IENVKDL 143
           VQ      GY+        G         S+  EP  +  R D+         +  + +L
Sbjct: 99  VQGGTADIGYDDEDSITSLG---------SLFVEPLWLFYREDAAKRLRKTATVSKLSEL 149

Query: 144 AGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSERSQALCDNKIDAFIY 200
            G RVN+G PGSG       +++    N+    L ++L+ +  + A  + ++DA ++
Sbjct: 150 KGWRVNVGTPGSGVPRLFSTLLEVNRLNDAEMHL-SQLEQTPATVAFLNGELDAVVF 205