Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  160 bits (404), Expect = 6e-44
 Identities = 105/335 (31%), Positives = 165/335 (49%), Gaps = 18/335 (5%)

Query: 7   MSLPKIIKMGAIAAAVIGSGVASAQDFITIGTGSVTGVYYPTGGAICKLVNKD----RKD 62
           M +  I+    +     G G+A    F  IGTG      +  GG I   ++        D
Sbjct: 25  MPIRSIVIAALLLLLTTGLGLAQDIRFFQIGTGPTGETRFAFGGLIANAISNPPGSRECD 84

Query: 63  HNIRCSV-------ESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKK 115
               C V       +STGG+I N++ I +  LD  +VQSD  Y  Y+GT  +  +G  + 
Sbjct: 85  KGGSCGVPGMVAVAKSTGGAIANIDAIAAKRLDAALVQSDIAYWAYHGTGIYKGKGAVQN 144

Query: 116 LRAVFSMHTEPFNIIARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSF 175
           LRA+  ++ E  +++AR D+ I +VKDL GKRV++G+  SG+    ++++ AFG      
Sbjct: 145 LRAIAMLYPESLHLVARKDAKIHSVKDLKGKRVSLGDKDSGELVHGRLLLAAFGMTESQI 204

Query: 176 KLAAELKGSERSQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANN 235
           K  + LK    + A+   ++DA + + G P   + E        L+P  GPE++K+ A  
Sbjct: 205 K-QSFLKPGPAADAVAAGQLDAMLVVDGLPVPIVSELAQRSDIVLIPLAGPEVDKMRATY 263

Query: 236 PYYAYSVVPAGMYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVF--ENFDTFTRLH 293
           P++A S +PA  Y G+D EVK+  V   LVT  E    ++Y +T+A++        T  H
Sbjct: 264 PFFAASSIPADTYRGSDAEVKTLDVGVVLVTGAEQPNDLIYGVTRALWHPSTQKLLTESH 323

Query: 294 P--AFANLKKEDMVTAGNSIPLHPGAVKYYKEAGL 326
           P     +L    +   G  I LH GA  YY +AG+
Sbjct: 324 PRGKLVSLSAAGLDKLG--IQLHGGASAYYFDAGV 356