Pairwise Alignments

Query, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)

Query: 16  GAIAAAVIG-SGVASAQD---------FITIGTGSVTGVYYPTGGAICKLVNKDRKDHNI 65
           G IA  V+G +G ASA D          + I +G V G Y      +  +++       +
Sbjct: 19  GCIAGGVLGLAGTASATDPRGVNANSGTVGIVSGGVEGTYVRIAADLASVLDDG---DTL 75

Query: 66  RCSVESTGGSIYNV-NTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHT 124
           R       GSI N+ + +    +D GIVQSD   +      E       ++++ +  ++ 
Sbjct: 76  RVLPMLGKGSIQNLKDVVLLKGIDVGIVQSDVLAYAKR---ERLLPNLDRRIKYIAKLYN 132

Query: 125 EPFNIIARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGS 184
           E  +I+A  D  +  ++DLAG++VN+   GSG   T  +V D  G       +  E + +
Sbjct: 133 EELHILAGPD--VTRIEDLAGRKVNVDVQGSGTSMTASLVFDMLG-------IKVEPQAN 183

Query: 185 ERSQA---LCDNKIDAFIYMVGHPNGAIKE 211
           +++ A   L   +I A  Y+ G P    ++
Sbjct: 184 DQALALEKLRKGEIAAMAYVAGKPTRLFRD 213