Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

 Score = 63.5 bits (153), Expect = 4e-14
 Identities = 112/461 (24%), Positives = 179/461 (38%), Gaps = 56/461 (12%)

Query: 129 VIASVVGMVLLLEATRRALGPPLMMVAALF---LLYTFAGPYMPDVIAHKGASLNKAMSH 185
           V+A++VG    L    R LG   +++  LF   ++   A P          A ++ +   
Sbjct: 178 VVAAIVGGFYALGPVFRTLGNYNLLIFFLFGVGVMVLMAVPIAFSFGLATFAYISLSTHT 237

Query: 186 LWLTTEGVFGVALG-VSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAV 244
             +   G F   +G +    V LFV  G ++E  G     +    S+LGH+RGG     V
Sbjct: 238 PSMVVIGRFDEGMGHLILLAVPLFVFLGQLIEMTGMAKAMVAFLASLLGHVRGGLHYVLV 297

Query: 245 VASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAA 304
            A  L   +SGS  A++        P M +    G K G +    S  G  T  I  +  
Sbjct: 298 GAMYLVSGISGSKAADMAAVAPVLFPEMTK---RGAKPGDLVALLSATGAQTETIPPSIV 354

Query: 305 FLMVEYV-GISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRHQSTVAQKLLS 363
            + +  V G+S   +    +LPAL+  +AL  +V        +SG+ +     V +  + 
Sbjct: 355 LITIGSVTGVSIAALFTGGLLPALVLAVALCSVVWWRYRDEDLSGVAKASWGEVGRAFII 414

Query: 364 FTATILGLCVISAVVYYGIGWTKEAFGDAATPILTVVLLAAYVGLVKISAPYAKEGLGID 423
               I    VI A V  G+          AT + T+ ++ + V  + I   +    L   
Sbjct: 415 SVPAIALPFVIRAAVIEGVA--------TATEVSTIGIVYSVVAGLLIYRRFDFRRL--- 463

Query: 424 ENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFS----------PGLSAFWASVFMI- 472
                + D A    + L  +     + W LT   FS          PG SA + +V ++ 
Sbjct: 464 --FPMLVDTAALSGAILFIIGAATGMAWALTQSGFSNALAEAMRALPGGSASFLAVSIVA 521

Query: 473 FILLTQ----RPLMALFNRTGSLGDAAKE-GVTDLLESL-VSGARNM------IGIGVAT 520
           F++L       P + LF     L   AK+ GV ++  S+ V  A  M       G+G   
Sbjct: 522 FVVLGSVLEGIPAIVLFGPL--LFPIAKQVGVNEVHYSMVVILAMGMGLFAPPFGVGYYA 579

Query: 521 AAA----------GTVVGVVTLTGIGLVMTDFVEFISGGNL 551
           A A            +VG +    IGL++   V +IS G L
Sbjct: 580 ACAISRISPDAGMKPIVGYMIALLIGLIIVAAVPWISTGFL 620