Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

 Score = 68.9 bits (167), Expect = 8e-16
 Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 13/274 (4%)

Query: 125 TQFDVIASVVGMVLLLEATRRALGPPLMMVAALFLLYTFAGPYMPDVIAH---KGASLNK 181
           T + V  + V +V++  A   AL P    +  L LL  F G     V+A      A    
Sbjct: 169 TDWRVTLAAVVLVVVAAAVFTALRPSFTGLGNLNLLIFFVGLVGAMVLAGIPIAFAFATA 228

Query: 182 AMSHLWLTTEGVFGVALGVS----TSFVFL----FVLFGAMLERAGAGAYFIKVAFSMLG 233
              ++ LTT     V +G      + FV L    FV  G ++E  G     +    S+LG
Sbjct: 229 TFGYIALTTRLPHSVVIGRMDEGMSHFVLLSVPLFVFLGVLIEMTGMARAMLAFLASLLG 288

Query: 234 HMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNG 293
           H+RGG     V A  L   +SGS  A++       +P M++ G    +  A+  A     
Sbjct: 289 HVRGGLQYVLVGAMYLVSGISGSKAADMAAIAPVLLPEMEKRGADRGELLALLAATGAQT 348

Query: 294 QLTPPIMGAAAFLMVEYVGISYVEVIKAAILPALISYIALIYIVHLEACKAGMSGLPRRH 353
           +  PP +      +    G+S   +    ++PAL+    L  +V L + K  +SG+ R  
Sbjct: 349 ETIPPSL--VLITIGSVTGVSIAALFAGGLMPALVVGALLCCVVWLRSRKDDLSGVRRAS 406

Query: 354 QSTVAQKLLSFTATILGLCVISAVVYYGIGWTKE 387
              +A+ L+     I    +I A V  G+    E
Sbjct: 407 FGEIAKALVVALPAIALPFIIRAAVIEGVATATE 440



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 14/126 (11%)

Query: 525 TVVGVVTLTGIGLVMTDFVEFISG-GNLMLMLIFTAVISLILGMGLP-------TTANYI 576
           T+  VV +     V T      +G GNL L++ F  ++  ++  G+P        T  YI
Sbjct: 174 TLAAVVLVVVAAAVFTALRPSFTGLGNLNLLIFFVGLVGAMVLAGIPIAFAFATATFGYI 233

Query: 577 VVSTLMAPVIVTLGAEHGLI-IPLIAVHLFVFYFGILADDTPPV-GLAAFAAAAIAKSDP 634
            ++T +   +V    + G+    L++V LFVF  G+L + T     + AF A+ +     
Sbjct: 234 ALTTRLPHSVVIGRMDEGMSHFVLLSVPLFVF-LGVLIEMTGMARAMLAFLASLLGH--- 289

Query: 635 IRTGIQ 640
           +R G+Q
Sbjct: 290 VRGGLQ 295