Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 42/136 (30%), Positives = 70/136 (51%)

Query: 208 FVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGTF 267
           FVL GA++   G     +  A  ++G +RGG +   ++AS   G +SGSS+A+  + G+ 
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120

Query: 268 TIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAAILPAL 327
            IP M+R G+P   A AV V+ S    LTPP   +  + +     +S   +  A ++P L
Sbjct: 121 LIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVPGL 180

Query: 328 ISYIALIYIVHLEACK 343
           +    L+ +  + A K
Sbjct: 181 LMSACLMVLCLIFAKK 196



 Score = 35.8 bits (81), Expect = 5e-06
 Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 518 VATAAAGTVVGVVTLTGIGLVMTDFVEFISGGNLMLMLIFTAVISLILGMGLPTTANYIV 577
           +  A A +   ++TL  I   +T     +S    ++++   A++ L+LG  +      ++
Sbjct: 281 ILIAFAASFGYIMTLMQIPAKITTLFLTLSDNRYVILMCINAML-LLLGTVMDMAPLILI 339

Query: 578 VSTLMAPVIVTLGAEHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAK 631
           ++ ++ PV++ +G +      ++ V+L +   G++   TPPVG   F  AA+ K
Sbjct: 340 LTPILLPVVLGIGVDPVHFGMIMLVNLGI---GLI---TPPVGAVLFVGAAVGK 387