Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Variovorax sp. SCN45

 Score = 72.0 bits (175), Expect = 1e-16
 Identities = 100/457 (21%), Positives = 181/457 (39%), Gaps = 45/457 (9%)

Query: 187 WLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVA 246
           WL  + + G+    +   V  F L G +LER+G     +     + G MRGG A A +  
Sbjct: 54  WLP-QRLIGIMANDTLLAVPFFTLMGLILERSGMAEDLLDTVGQVFGPMRGGLALAVIFV 112

Query: 247 SGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFL 306
             L    +G   A+V++ G  ++P+M R G+    +  V  A+ T  Q+ PP +     +
Sbjct: 113 GALLAATTGVVAASVISMGLISLPIMLRYGYDRRLSSGVIAASGTLAQIIPPSL--VLII 170

Query: 307 MVEYVGISYVEVIKAAILPA-LISYIALIYIVHLEACK-AGMSGLPRRHQSTVAQKLLSF 364
           M + +G S  ++ K A LP  ++  + ++Y+V L   + A +  LP   ++         
Sbjct: 171 MADQLGKSVGDMYKGAFLPGFMLMGLYVVYVVFLAIFRPAQVPALPPEARTFREPNGSGG 230

Query: 365 TATILGLCVISAVVYYGIGWTKEAF-----GDAATPILT-VVLLAAYVGLVKISAPYAKE 418
             +++ L  +SAVV   +     A      G   T + T   ++ A  G V ++   A  
Sbjct: 231 YTSLVALAALSAVVAVWLARNMAAVHTWFQGQEVTSVATDEKVVVAMCGGVFVALVIALI 290

Query: 419 GLGIDENLQYVPDVAPTLKSGLHYLLPIVVLVWCLTVERFSPGLSAFWASVFMIFILLTQ 478
             G+  NL     ++   +     L+P ++L++ +              ++F+     T+
Sbjct: 291 NKGLKLNL-----LSRLAERVTFVLIPPLLLIFLVL------------GTIFLGVATPTE 333

Query: 479 RPLMALFNRTGSLGDAAKEGV-----TDLLESLVSGARNMIGIGVATAAAGTVVGVVTLT 533
              M      G+LG      V       LL+  ++    +    +      TV  +V   
Sbjct: 334 GGAM------GALGALIMAWVRRRMSLALLKQALASTTKLSSFVMFILIGATVFSLVFQA 387

Query: 534 GIGLVMTDFVEFISGGNLMLMLIFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAEH 593
             G +  + +     G  +  LI   V+   L   L       +V  L+APV   LG + 
Sbjct: 388 ADGPIWVEHLLSSLPGGPVGFLIAVNVLVFFLAFFLDYFELSFIVVPLLAPVAHKLGIDL 447

Query: 594 GLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIA 630
                L+AV++   +        PP G A F   ++A
Sbjct: 448 IWFGVLLAVNMQTSFM------HPPFGFALFFLRSVA 478