Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 207 LFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVASGLSGLVSGSSIANVVTTGT 266
           +FVL G++ +R+G     +  A +++G   G     A+  +   G +SGS  AN    G 
Sbjct: 65  MFVLVGSIFDRSGVALRLVNFAIAIVGRGPGMLPLVAIAVAMFLGGISGSGPANAAAVGA 124

Query: 267 FTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLMVEYV--GISYVEVIKAAIL 324
             I  M R G+P   + +V  AA+    L PP   + AF++   +  G S   +  A ++
Sbjct: 125 VMIAAMSRAGYPAAFSASVVGAAAATDILIPP---SVAFIVYSVLVPGASVPALFAAGMV 181

Query: 325 PALISYIALIYIVHLEACKAGMSGL 349
           P +++ +AL+    L A K  M  L
Sbjct: 182 PGVLAGLALMIPAVLLARKHKMGAL 206