Pairwise Alignments

Query, 854 a.a., DUF3394 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 188 LTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFIKVAFSMLGHMRGGPAKAAVVAS 247
           +  + V G A       V  F+L G ++   G     + +A +++GH++GG     ++A 
Sbjct: 42  ILAQNVIGGADSFPLLAVPFFMLAGEIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAG 101

Query: 248 GLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAFLM 307
            L   +SGS++A+        +P+M + G    +AG +  A    G + PP +G   F +
Sbjct: 102 CLLSALSGSAVADAAALTALLLPMMVKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGV 161

Query: 308 VEYVGISYVEVIKAAILPALI 328
              V IS  ++  AAI+P L+
Sbjct: 162 AANVSIS--KLFMAAIVPGLL 180